PubChem Scraper — Compounds, Properties & SMILES

Scrape PubChem by name, CID, or formula search. Extract molecular formula, weight, SMILES, InChIKey, IUPAC name, XLogP, and synonyms for drug discovery, cheminformatics, and research. No API key needed.

Open on Apify ↗ Read the guide

Pricing

Pay per event

Charged only on successful results.

Output

JSON / CSV

Clean schema, ready for ETL.

Runtime

4 runs

1 users total

Infra

Hosted

No setup — runs in the cloud on Apify.

What it returns

Scrape PubChem by name, CID, or formula search. Extract molecular formula, weight, SMILES, InChIKey, IUPAC name, XLogP, and synonyms for drug discovery, cheminformatics, and research.

How to run it

Open the actor on Apify (button above).
Fill the input schema — most fields have sensible defaults.
Click Run. Results land in the dataset within minutes.
Export as JSON or CSV, or pull via the dataset API.

Guides for this scraper

data

How to Scrape PubChem: Compounds, Properties & SMILES

Pull compound data from the NCBI PubChem PUG REST API — molecular formula, weight, SMILES, InChIKey, IUPAC name, XLogP and synonyms. Keyless, 3 lookup modes.

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